I have a limited Depths Doombringer and two normal ones. The Limited guy shows up in Rune Manager and I have him in decks. The two normal guys show up in rune checklist but don't appear in rune manager, so I can't include them. Can you please help?
You may need to set the filters in Rune Manager. Try setting the rarity to Legendary. They should show up then. There are some use cases on the website where if there are two versions of a rune but of different rarities both rarities don't always show up but if you set the rarity filter then the one for the specified rarity will.